PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2AL_BD0C7A9A5.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 376aa    MW: 41664.1 Da    PI: 6.9257
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2AL_BD0C7A9A5.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.92.9e-1078119341
                            XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
                 bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                            + k+ rr+++NReAAr+sR+RKka+i++Le    k ++Le+e
  Traes_2AL_BD0C7A9A5.2  78 KEKVMRRLAQNREAARKSRLRKKAYIQQLESsriKLAQLEQE 119
                            56899************************9722244444444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.7E-874124No hitNo description
SMARTSM003385.0E-676136IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.2278122IPR004827Basic-leucine zipper domain
PfamPF001703.1E-779119IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.13E-780124No hitNo description
PROSITE patternPS0003608398IPR004827Basic-leucine zipper domain
PfamPF141446.0E-26179254IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MAMYERAPPQ QQHHQHQQQQ QPALGMWSSE PYKVDSGGQA TSGSSIMEPD AKFDHPGLDE  60
DPHMDELETA DQGASKPKEK VMRRLAQNRE AARKSRLRKK AYIQQLESSR IKLAQLEQEL  120
QRTRQQQGMY GGNPGTSLHR GGSAGHLGFA AAGQMMDPGV AAFEIAYGHW VDDQKRNTEE  180
LRSALQPGQG TSELELEVMV QTGLANYDNL FRVKGAAAQA DVFCVMSGLW RSPAERFFLW  240
IGGFRPSEVL KILSPQLQPM SEPQSVAVYA LQLTSAQAED ALSQGMQKLQ QTLAESLTDP  300
FAAPDAYMAG AIEKLKGLVG FVQQADHLRQ ETLQNMHRIL TTRQAAKGLL VLGDYFQRLR  360
ALSTLWAARP HESAIS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ5964140.0KJ596414.1 Triticum aestivum transcription factor TGA4 (TGA4) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001183840.11e-161putative bZIP transcription factor superfamily protein
RefseqXP_003580646.11e-161PREDICTED: transcription factor TGA4-like
SwissprotQ391621e-114TGA4_ARATH; Transcription factor TGA4
TrEMBLA0A096ULI10.0A0A096ULI1_WHEAT; Uncharacterized protein
STRINGMLOC_61530.20.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35713877
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10030.21e-108TGACG motif-binding factor 4
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]